SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_048300172
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: HSCe_22y_CD34+,CD38-,Lineage-
Genomic region: chr16:2507659-2517178
Size: 9519
Super-enhancer rank 172
Number of SE elements: 4
ChIP density(Case|Control): 8396.7099|892.8822
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ATP6V0C;
ROSE Overlap ATP6V0C;
ROSE Proximal CEMP1; C16orf59; MIR3178; AMDHD2; TBC1D24; NTN3; PDPK1; MIR6768;
ROSE Closest ATP6V0C;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_048300172 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers