SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_048101562
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MDA-MB231
Genomic region: chr20:63679741-63689578
Size: 9837
Super-enhancer rank 1562
Number of SE elements: 1
ChIP density(Case|Control): 16224.1641|1209.951
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TNFRSF6B;
ROSE Overlap RTEL1-TNFRSF6B; RTEL1;
ROSE Proximal ZGPAT; LIME1; TNFRSF6B; STMN3; ARFRP1;
ROSE Closest TNFRSF6B;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_048101562 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers