SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_047900789
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Head and neck
Biosample name: SCC25
Genomic region: chr3:196760504-196795483
Size: 34979
Super-enhancer rank 789
Number of SE elements: 25
ChIP density(Case|Control): 27752.3386|5705.0749
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RNU6-42P;
ROSE Overlap RNU6-42P; PAK2;
ROSE Proximal CEP19; PIGX;
ROSE Closest RNU6-42P;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_047900789 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers