SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_047700044
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Colon
Biosample name: intestinal epithelial organoids_139a
Genomic region: chr19:13140880-13196275
Size: 55395
Super-enhancer rank 44
Number of SE elements: 15
ChIP density(Case|Control): 67543.1235|5860.791
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: IER2;
ROSE Overlap NACC1; IER2; STX10;
ROSE Proximal LYL1; TRMT1;
ROSE Closest IER2;
Lasso TRMT1; NFIX; STX10; IER2; LYL1; NACC1;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_047700044 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers