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Super-enhancer overview

SE ID: SE_02_047500869
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Induced hepatocyte-like cells
Biosample name: hepatocyte-like cells
Genomic region: chr5:140221885-140262624
Size: 40739
Super-enhancer rank 869
Number of SE elements: 10
ChIP density(Case|Control): 15981.9097|4187.9692
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PFDN1 ;
ROSE Overlap CYSTM1 ; PFDN1 ;
ROSE Proximal ;
ROSE Closest PFDN1 ;
Lasso ;
PreSTIGE ;
ABC PCDHA10 ; PCDHA12 ; PCDHA13 ;
BETA CYSTM1 ; LOC101929719 ; PFDN1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_047500869 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers