SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_046900397
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: 786-O PBRM1 shRNA#2
Genomic region: chr20:45336474-45344786
Size: 8312
Super-enhancer rank 397
Number of SE elements: 8
ChIP density(Case|Control): 4367.956|933.4376
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SDC4;
ROSE Overlap SDC4;
ROSE Proximal SYS1; SYS1-DBNDD2; MATN4; RBPJL; TP53TG5;
ROSE Closest SDC4;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_046900397 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers