SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_046800088
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: 786-O PBRM1 shRNA#1
Genomic region: chr5:168303724-168315524
Size: 11800
Super-enhancer rank 88
Number of SE elements: 4
ChIP density(Case|Control): 3341.76|916.86
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: WWC1;
ROSE Overlap WWC1;
ROSE Proximal WWC1;
ROSE Closest WWC1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_046800088 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers