SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_044000465
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone
Biosample name: LM7
Genomic region: chr17:44086103-44111846
Size: 25743
Super-enhancer rank 465
Number of SE elements: 16
ChIP density(Case|Control): 27545.01|2625.786
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HDAC5 ;
ROSE Overlap HDAC5 ;
ROSE Proximal G6PC3 ; HDAC5 ; C17orf53 ; LSM12 ;
ROSE Closest HDAC5 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA G6PC3 ; ASB16-AS1 ; ATXN7L3 ; HDAC5 ; TMUB2 ; PYY ; C17orf53 ; LSM12 ; TMEM101 ; ASB16 ; NAGS ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_044000465 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers