SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_044000417
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone
Biosample name: LM7
Genomic region: chr19:48872356-48876383
Size: 4027
Super-enhancer rank 417
Number of SE elements: 1
ChIP density(Case|Control): 27150.8394|597.2041
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PPP1R15A ;
ROSE Overlap PPP1R15A ;
ROSE Proximal NUCB1 ; PLEKHA4 ; TULP2 ; HSD17B14 ; NUCB1-AS1 ;
ROSE Closest PPP1R15A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PLEKHA4 ; BCAT2 ; DHDH ; BAX ; TULP2 ; PPP1R15A ; NUCB1-AS1 ; FTL ; NUCB1 ; HSD17B14 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_044000417 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers