SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_044000340
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone
Biosample name: LM7
Genomic region: chr5:179818046-179821844
Size: 3798
Super-enhancer rank 340
Number of SE elements: 1
ChIP density(Case|Control): 30998.8962|1007.9892
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SQSTM1 ;
ROSE Overlap SQSTM1 ;
ROSE Proximal LTC4S ; MGAT4B ; C5orf45 ; MIR1229 ;
ROSE Closest SQSTM1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR1229 ; TBC1D9B ; MGAT4B ; C5orf45 ; LTC4S ; SQSTM1 ; MAML1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_044000340 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers