SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_044000238
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone
Biosample name: LM7
Genomic region: chr2:219271122-219287033
Size: 15911
Super-enhancer rank 238
Number of SE elements: 7
ChIP density(Case|Control): 39444.9601|3218.7953
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DNAJB2 ;
ROSE Overlap DNAJB2 ; TUBA4B ;
ROSE Proximal TUBA4A ; ATG9A ; GLB1L ; STK16 ; MIR153-1 ; RESP18 ; ANKZF1 ; PTPRN ;
ROSE Closest DNAJB2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA STK16 ; ATG9A ; GLB1L ; RESP18 ; ABCB6 ; DNAJB2 ; ZFAND2B ; ANKZF1 ; PTPRN ; MIR153-1 ; TUBA4B ; TUBA4A ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_044000238 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers