SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_042800607
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: 12364284_VHL-
Genomic region: chr1:149848887-149854638
Size: 5751
Super-enhancer rank 607
Number of SE elements: 1
ChIP density(Case|Control): 43485.728|956.709
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HIST2H2BC;
ROSE Overlap HIST2H2BC; HIST2H3A; HIST2H2AA4;
ROSE Proximal HIST2H2BF; BOLA1; HIST2H4B; HIST2H3D; HIST2H2BE; HIST2H2AB; HIST2H2AC; HIST2H3C; HIST2H2AA3;
ROSE Closest HIST2H2BC;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_042800607 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers