SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_042800553
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: 12364284_VHL-
Genomic region: chr12:6530650-6548757
Size: 18107
Super-enhancer rank 553
Number of SE elements: 5
ChIP density(Case|Control): 45731.0392|1082.7986
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GAPDH;
ROSE Overlap GAPDH; NCAPD2; IFFO1;
ROSE Proximal IFFO1; MRPL51; NOP2; SCARNA11; SCARNA10;
ROSE Closest GAPDH;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_042800553 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers