SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_042800375
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: 12364284_VHL-
Genomic region: chr1:201435657-201489985
Size: 54328
Super-enhancer rank 375
Number of SE elements: 13
ChIP density(Case|Control): 67328.6904|12397.6496
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PHLDA3;
ROSE Overlap PHLDA3; CSRP1;
ROSE Proximal CSRP1; RPS10P7; TNNI1; LAD1;
ROSE Closest PHLDA3;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_042800375 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers