SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_042700549
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116_shPAF1
Genomic region: chr12:53065699-53101385
Size: 35686
Super-enhancer rank 549
Number of SE elements: 3
ChIP density(Case|Control): 48397.3532|2544.4118
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SPRYD3;
ROSE Overlap IGFBP6; SPRYD3;
ROSE Proximal TENC1; SOAT2; LOC283335;
ROSE Closest SPRYD3;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_042700549 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers