SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_042700486
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116_shPAF1
Genomic region: chr10:80193693-80209989
Size: 16296
Super-enhancer rank 486
Number of SE elements: 4
ChIP density(Case|Control): 52153.7184|1623.0816
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ANXA11 ;
ROSE Overlap ANXA11 ;
ROSE Proximal ANXA11 ;
ROSE Closest ANXA11 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ANXA11 ; PLAC9 ; MAT1A ; LINC00857 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_042700486 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers