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Super-enhancer overview

SE ID: SE_02_042700457
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116_shPAF1
Genomic region: chr6:26193596-26207624
Size: 14028
Super-enhancer rank 457
Number of SE elements: 1
ChIP density(Case|Control): 53414.4156|1665.1236
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HIST1H2BF;
ROSE Overlap HIST1H4E; HIST1H2BF; HIST1H3D; HIST1H2AD;
ROSE Proximal HIST1H2BG; HIST1H4D; HIST1H3F; HIST1H3E; HIST1H4G; HIST1H2BH; HIST1H2BE; HIST1H2AE; HIST1H2BD; HIST1H4F; HIST1H1D; HIST1H1E;
ROSE Closest HIST1H2BF;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_042700457 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers