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Super-enhancer overview

SE ID: SE_02_042700452
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116_shPAF1
Genomic region: chr6:26118105-26127779
Size: 9674
Super-enhancer rank 452
Number of SE elements: 1
ChIP density(Case|Control): 53046.4116|973.2044
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HIST1H2BC;
ROSE Overlap HIST1H2AC; HIST1H2BC;
ROSE Proximal HIST1H2BD; HFE; HIST1H1T; HIST1H1E; HIST1H4C;
ROSE Closest HIST1H2BC;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_042700452 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers