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Super-enhancer overview

SE ID: SE_02_042700370
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116_shPAF1
Genomic region: chr17:7833549-7851961
Size: 18412
Super-enhancer rank 370
Number of SE elements: 3
ChIP density(Case|Control): 60615.9864|1327.5052
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KDM6B;
ROSE Overlap DNAH2; KDM6B;
ROSE Proximal LSMD1; CYB5D1; CHD3; TMEM88;
ROSE Closest KDM6B;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_042700370 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers