SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_042700350
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116_shPAF1
Genomic region: chr17:75776091-75786894
Size: 10803
Super-enhancer rank 350
Number of SE elements: 2
ChIP density(Case|Control): 63775.5105|1996.3944
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: H3F3B ;
ROSE Overlap UNK ; H3F3B ;
ROSE Proximal GALK1 ;
ROSE Closest H3F3B ;
Lasso ;
PreSTIGE ;
ABC ;
BETA UNK ; WBP2 ; ITGB4 ; MIR4738 ; UNC13D ; TRIM47 ; H3F3B ; GALK1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_042700350 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers