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Super-enhancer overview

SE ID: SE_02_042700338
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116_shPAF1
Genomic region: chr8:93725017-93742859
Size: 17842
Super-enhancer rank 338
Number of SE elements: 2
ChIP density(Case|Control): 66625.5964|3439.9376
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: C8ORF39 ;
ROSE Overlap C8orf39 ; RBM12B ; FAM92A1 ;
ROSE Proximal LOC642924 ; TMEM67 ;
ROSE Closest C8orf39 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LINC00535 ; FAM92A1 ; TMEM67 ; RBM12B ; RBM12B-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_042700338 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers