SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_042700233
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116_shPAF1
Genomic region: chr11:65908820-65921204
Size: 12384
Super-enhancer rank 233
Number of SE elements: 1
ChIP density(Case|Control): 79873.0848|1055.1168
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: C11ORF68 ;
ROSE Overlap C11orf68 ; DRAP1 ;
ROSE Proximal CCDC85B ; CTSW ; EFEMP2 ; SART1 ; TSGA10IP ; FIBP ; FOSL1 ; MUS81 ;
ROSE Closest C11orf68 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA FIBP ; MUS81 ; C11orf68 ; EIF1AD ; TSGA10IP ; CFL1 ; EFEMP2 ; BANF1 ; CST6 ; CCDC85B ; SNX32 ; FOSL1 ; DRAP1 ; SART1 ; CTSW ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_042700233 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers