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Super-enhancer overview

SE ID: SE_02_042700224
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116_shPAF1
Genomic region: chr7:27160378-27174952
Size: 14574
Super-enhancer rank 224
Number of SE elements: 1
ChIP density(Case|Control): 81741.1938|1372.8708
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR196B;
ROSE Overlap MIR196B; HOXA10; HOXA9;
ROSE Proximal HOXA6; HOXA11-AS1; HOXA11; HOXA3; HOXA5; HOXA7; HOXA4; HOXA13;
ROSE Closest MIR196B;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_042700224 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers