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Super-enhancer overview

SE ID: SE_02_042700216
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116_shPAF1
Genomic region: chr16:89487811-89510267
Size: 22456
Super-enhancer rank 216
Number of SE elements: 3
ChIP density(Case|Control): 84654.6288|2250.0912
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ANKRD11 ;
ROSE Overlap SPG7 ; ANKRD11 ;
ROSE Proximal ;
ROSE Closest ANKRD11 ;
Lasso ;
PreSTIGE ;
ABC LOC101927817 ;
BETA RPL13 ; CPNE7 ; ANKRD11 ; SPG7 ; LOC101927817 ; SNORD68 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_042700216 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers