SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_042700213
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116_shPAF1
Genomic region: chr11:67351015-67381378
Size: 30363
Super-enhancer rank 213
Number of SE elements: 2
ChIP density(Case|Control): 85225.9047|2000.9217
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CLCF1;
ROSE Overlap LOC100130987; CLCF1; POLD4;
ROSE Proximal PPP1CA; RAD9A; TBC1D10C; SSH3; CARNS1; RPS6KB2;
ROSE Closest CLCF1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_042700213 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers