SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_042700208
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116_shPAF1
Genomic region: chr9:37462700-37488241
Size: 25541
Super-enhancer rank 208
Number of SE elements: 2
ChIP density(Case|Control): 86974.7673|2058.6046
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZBTB5 ;
ROSE Overlap ZBTB5 ; POLR1E ;
ROSE Proximal GRHPR ;
ROSE Closest ZBTB5 ;
Lasso ;
PreSTIGE ;
ABC GRHPR ; ZBTB5 ; POLR1E ; ALDH1B1 ; ANKRD18A ; FAM201A ; SLC25A51 ; DCAF10 ; EXOSC3 ; TRMT10B ; FRMPD1 ; TOMM5 ; ZCCHC7 ; EBLN3P ;
BETA GRHPR ; POLR1E ; ZBTB5 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_042700208 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers