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Super-enhancer overview

SE ID: SE_02_042700188
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116_shPAF1
Genomic region: chr6:26019425-26036015
Size: 16590
Super-enhancer rank 188
Number of SE elements: 1
ChIP density(Case|Control): 92152.473|1688.862
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HIST1H4B;
ROSE Overlap HIST1H4A; HIST1H3B; HIST1H4B; HIST1H2AB; HIST1H3A;
ROSE Proximal HIST1H1A; HIST1H3C; HIST1H1C; HIST1H2BB;
ROSE Closest HIST1H4B;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_042700188 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers