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Super-enhancer overview

SE ID: SE_02_042700178
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116_shPAF1
Genomic region: chr19:43739100-43785970
Size: 46870
Super-enhancer rank 178
Number of SE elements: 4
ChIP density(Case|Control): 95478.877|3566.807
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: C19ORF61;
ROSE Overlap C19orf61; KCNN4;
ROSE Proximal ZNF283; LYPD5; IRGC;
ROSE Closest C19orf61;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_042700178 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers