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Super-enhancer overview

SE ID: SE_02_042700148
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116_shPAF1
Genomic region: chr17:40900715-40923437
Size: 22722
Super-enhancer rank 148
Number of SE elements: 4
ChIP density(Case|Control): 105732.2826|2283.561
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KRT23;
ROSE Overlap KRT23;
ROSE Proximal KRT39; KRT12; KRT20;
ROSE Closest KRT23;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_042700148 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers