SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_042700119
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116_shPAF1
Genomic region: chr10:104108487-104124759
Size: 16272
Super-enhancer rank 119
Number of SE elements: 2
ChIP density(Case|Control): 118793.736|2619.792
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: C10ORF78 ;
ROSE Overlap C10orf78 ;
ROSE Proximal COL17A1 ;
ROSE Closest C10orf78 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SFR1 ; COL17A1 ; MIR936 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_042700119 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers