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Super-enhancer overview

SE ID: SE_02_042700062
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116_shPAF1
Genomic region: chr19:13835539-13857220
Size: 21681
Super-enhancer rank 62
Number of SE elements: 1
ChIP density(Case|Control): 176611.2579|1669.437
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR23A;
ROSE Overlap LOC284454; MIR24-2; MIR23A; MIR27A;
ROSE Proximal MIR181C; ZSWIM4; MIR181D; CC2D1A; NANOS3; C19orf57;
ROSE Closest MIR23A;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_042700062 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers