SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_042700045
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116_shPAF1
Genomic region: chr10:93420926-93484316
Size: 63390
Super-enhancer rank 45
Number of SE elements: 7
ChIP density(Case|Control): 221636.796|4906.386
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MYOF ;
ROSE Overlap MYOF ;
ROSE Proximal CEP55 ; MYOF ;
ROSE Closest MYOF ;
Lasso ;
PreSTIGE ;
ABC ;
BETA CEP55 ; MYOF ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_042700045 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers