SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_042700012
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116_shPAF1
Genomic region: chr7:130873617-130925940
Size: 52323
Super-enhancer rank 12
Number of SE elements: 1
ChIP density(Case|Control): 413728.4256|5493.915
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC646329;
ROSE Overlap MIR29A; LOC646329; MIR29B1;
ROSE Proximal ;
ROSE Closest LOC646329;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_042700012 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers