SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_042700004
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116_shPAF1
Genomic region: chr9:21519006-21618660
Size: 99654
Super-enhancer rank 4
Number of SE elements: 6
ChIP density(Case|Control): 510716.7846|10892.1822
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC554202;
ROSE Overlap LOC554202;
ROSE Proximal IFNE; MIR31;
ROSE Closest LOC554202;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_042700004 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers