SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_042400406
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Colon
Biosample name: SW620
Genomic region: chr12:6531055-6543617
Size: 12562
Super-enhancer rank 406
Number of SE elements: 1
ChIP density(Case|Control): 34780.4094|3208.3348
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GAPDH;
ROSE Overlap GAPDH; NCAPD2; IFFO1;
ROSE Proximal IFFO1; MRPL51; NOP2; SCARNA11; SCARNA10;
ROSE Closest GAPDH;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_042400406 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers