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Super-enhancer overview

SE ID: SE_02_042100166
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: BE2C_3
Genomic region: chr5:141506519-141535502
Size: 28983
Super-enhancer rank 166
Number of SE elements: 4
ChIP density(Case|Control): 64046.6334|6335.6838
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PCDHGC5;
ROSE Overlap PCDHGB3; PCDHGC3; PCDHGA2; PCDHGA3; PCDHGA8; PCDHGA11; PCDHGA10; PCDHGA12; PCDHGA4; PCDHGA9; PCDHGB6; PCDHGC5; DIAPH1; PCDHGA5; PCDHGB4; PCDHGB5; PCDHGB7; PCDHGA7; PCDHGB1; PCDHGC4; PCDHGA1; PCDHGA6; PCDHGB2;
ROSE Proximal PCDHGC3; PCDHGC4; PCDHGC5;
ROSE Closest PCDHGC5;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_042100166 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers