SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_042000136
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Pectoralis major muscle
Biosample name: LHCN-M2_dox_6h
Genomic region: chr12:54250902-54279844
Size: 28942
Super-enhancer rank 136
Number of SE elements: 8
ChIP density(Case|Control): 17339.1522|2520.8482
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CBX5;
ROSE Overlap CBX5;
ROSE Proximal HNRNPA1P10; NFE2; HNRNPA1; COPZ1;
ROSE Closest CBX5;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_042000136 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers