SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_041500338
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Stomach
Biosample name: YCC22
Genomic region: chr1:3540675-3549076
Size: 8401
Super-enhancer rank 338
Number of SE elements: 5
ChIP density(Case|Control): 41138.8569|167.1799
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ARHGEF16 ;
ROSE Overlap MEGF6 ;
ROSE Proximal MIR551A ;
ROSE Closest MIR551A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ARHGEF16 ; MEGF6 ; MIR551A ; TPRG1L ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_041500338 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers