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Super-enhancer overview

SE ID: SE_02_040900149
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: G401_NoDox
Genomic region: chr12:53971705-53988007
Size: 16302
Super-enhancer rank 149
Number of SE elements: 1
ChIP density(Case|Control): 32282.8506|2528.4402
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HOXC10;
ROSE Overlap HOXC11; HOXC10;
ROSE Proximal MIR196A2; HOTAIR; HOXC9; MIR615; HOXC12; HOXC13; HOXC8; HOXC6; HOXC4; HOXC5;
ROSE Closest HOXC10;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_040900149 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers