SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_040800593
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: G401_Dox
Genomic region: chr17:48047072-48057611
Size: 10539
Super-enhancer rank 593
Number of SE elements: 1
ChIP density(Case|Control): 18736.2342|1201.446
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NFE2L1 ;
ROSE Overlap NFE2L1 ;
ROSE Proximal COPZ2 ; CBX1 ; SNX11 ; MIR152 ;
ROSE Closest NFE2L1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PRR15L ; SNX11 ; CDK5RAP3 ; CBX1 ; COPZ2 ; MIR152 ; NFE2L1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_040800593 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers