SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_040800588
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: G401_Dox
Genomic region: chr19:47243341-47274688
Size: 31347
Super-enhancer rank 588
Number of SE elements: 4
ChIP density(Case|Control): 20087.1576|2416.8537
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CCDC9 ;
ROSE Overlap CCDC9 ;
ROSE Proximal BBC3 ; MIR3191 ; MIR3190 ; PRR24 ; C5AR1 ;
ROSE Closest CCDC9 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA BBC3 ; INAFM1 ; MIR3190 ; C5AR1 ; C5AR2 ; DHX34 ; MIR3191 ; CCDC9 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_040800588 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers