SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_040800524
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: G401_Dox
Genomic region: chr5:82973385-83036281
Size: 62896
Super-enhancer rank 524
Number of SE elements: 10
ChIP density(Case|Control): 28020.168|9126.2096
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SCARNA18 ;
ROSE Overlap ;
ROSE Proximal XRCC4 ; SCARNA18 ; TMEM167A ;
ROSE Closest SCARNA18 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA XRCC4 ; TMEM167A ; SCARNA18 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_040800524 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers