SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_040800513
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: G401_Dox
Genomic region: chr5:177469819-177502482
Size: 32663
Super-enhancer rank 513
Number of SE elements: 6
ChIP density(Case|Control): 21796.0199|2720.8279
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PDLIM7 ;
ROSE Overlap PDLIM7 ; DBN1 ; DOK3 ;
ROSE Proximal DOK3 ; PRR7 ; GRK6 ; PDLIM7 ; DDX41 ;
ROSE Closest PDLIM7 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PDLIM7 ; GRK6 ; DOK3 ; F12 ; DDX41 ; PRR7-AS1 ; FAM193B ; PRR7 ; DBN1 ; PFN3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_040800513 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers