SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_040800496
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: G401_Dox
Genomic region: chr1:25873144-25903992
Size: 30848
Super-enhancer rank 496
Number of SE elements: 6
ChIP density(Case|Control): 22596.16|3229.7856
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PAQR7 ;
ROSE Overlap STMN1 ;
ROSE Proximal PAQR7 ; C1orf135 ; LOC646471 ; MIR3917 ;
ROSE Closest PAQR7 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MTFR1L ; STMN1 ; MIR3917 ; AUNIP ; SEPN1 ; LOC646471 ; PAQR7 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_040800496 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers