SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_040800052
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: G401_Dox
Genomic region: chr17:59751610-59811247
Size: 59637
Super-enhancer rank 52
Number of SE elements: 12
ChIP density(Case|Control): 70801.0464|7919.7936
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR21 ;
ROSE Overlap TMEM49 ;
ROSE Proximal PTRH2 ; MIR21 ;
ROSE Closest MIR21 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA VMP1 ; PTRH2 ; MIR21 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_040800052 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers