SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_040800008
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: G401_Dox
Genomic region: chr5:139626963-139766455
Size: 139492
Super-enhancer rank 8
Number of SE elements: 24
ChIP density(Case|Control): 124078.134|13628.3684
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CXXC5 ;
ROSE Overlap UBE2D2 ; CXXC5 ;
ROSE Proximal PSD2 ;
ROSE Closest CXXC5 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA CXXC5 ; LOC101929696 ; PSD2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_040800008 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers