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Super-enhancer overview

SE ID: SE_02_039800340
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MDA-MB-231-MCF-7
Genomic region: chr6:31732274-31748174
Size: 15900
Super-enhancer rank 340
Number of SE elements: 3
ChIP density(Case|Control): 40583.16|1963.65
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MSH5;
ROSE Overlap CLIC1; MSH5;
ROSE Proximal VARS; BAT5; C6orf26; LY6G6C; DDAH2; C6orf25; LY6G6D; LY6G6F; MSH5; LY6G6E; C6orf27;
ROSE Closest MSH5;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_039800340 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers