SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_039700001
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: CAL51-MCF-7
Genomic region: chr17:59746981-59860273
Size: 113292
Super-enhancer rank 1
Number of SE elements: 25
ChIP density(Case|Control): 260288.37|12937.9464
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR21;
ROSE Overlap TUBD1; MIR21; TMEM49;
ROSE Proximal PTRH2; RPS6KB1; TUBD1;
ROSE Closest MIR21;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_039700001 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers