SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_039500459
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: BT-549
Genomic region: chr9:35686207-35692544
Size: 6337
Super-enhancer rank 459
Number of SE elements: 1
ChIP density(Case|Control): 28701.5404|3342.1338
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TPM2;
ROSE Overlap TPM2;
ROSE Proximal SIT1; CCDC107; TLN1; CA9; CREB3; C9orf100; RMRP;
ROSE Closest TPM2;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_039500459 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers