SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_039500018
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: BT-549
Genomic region: chr17:48561194-48617233
Size: 56039
Super-enhancer rank 18
Number of SE elements: 1
ChIP density(Case|Control): 125163.1065|10809.9231
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC404266;
ROSE Overlap HOXB4; HOXB6; LOC404266; HOXB7; HOXB5; HOXB8; HOXB3; MIR10A;
ROSE Proximal HOXB1; MIR196A1; HOXB2; HOXB9;
ROSE Closest LOC404266;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_039500018 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers